Report Type: Expression Report Date: 01:27PM 10/30/2008 ______________________________________________________________________ Filename: Arabidopsis hWS3_2.CHP Probe Array Type: ATH1-121501 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 0.970 Scale Factor (SF): 23.433 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 29.43 Std: 0.15 Min: 29.10 Max: 29.90 Noise: Avg: 0.79 Std: 0.03 Min: 0.70 Max: 0.90 Corner+ Avg: 47 Count: 32 Corner- Avg: 10490 Count: 32 Central- Avg: 9104 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 22810 Number Present: 12463 54.6% Number Absent: 10037 44.0% Number Marginal: 310 1.4% Average Signal (P): 1326.4 Average Signal (A): 52.0 Average Signal (M): 164.1 Average Signal (All): 749.8 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-R2-AT-ACTIN 8425.3 P 2802.5 P 14703.1 P 8643.64 1.75 AFFX-R2-AT-GAPDH 6390.7 P 9224.1 P 7807.39 1.44 AFFX-R2-AT-UBQ 4309.0 P 22109.7 P 13209.39 5.13 AFFX-ATHAL-ACTIN 346.1 P 1764.7 P 8684.3 P 3598.39 25.09 AFFX-ATHAL-GAPDH 1783.7 P 5444.3 P 13420.3 P 6882.75 7.52 AFFX-ATHAL-UBQ 2350.4 P 5395.4 P 26719.7 P 11488.50 11.37 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 4284.2 P 8945.6 P 7889.3 P 7039.70 1.84 AFFX-BIOC 17007.2 P 9106.7 P 13056.91 0.54 AFFX-BIOD 21720.7 P 47243.5 P 34482.12 2.18 AFFX-CRE 95657.2 P 152948.2 P 124302.69 1.60 AFFX-DAP 68.7 A 6.4 A 79.6 A 51.60 1.16 AFFX-LYS 45.7 A 8.7 A 5.8 A 20.06 0.13 AFFX-PHE 2.6 A 9.2 A 69.1 A 26.94 27.00 AFFX-THR 25.7 A 33.9 A 81.8 A 47.13 3.18 AFFX-TRP 8.5 A 7.1 A 38.6 A 18.09 4.55 AFFX-R2-EC-BIOB 6634.3 P 7194.0 P 7106.6 P 6978.29 1.07 AFFX-R2-EC-BIOC 18733.3 P 14734.9 P 16734.14 0.79 AFFX-R2-EC-BIOD 45386.2 P 60037.7 P 52711.92 1.32 AFFX-R2-P1-CRE 111050.5 P 130238.8 P 120644.62 1.17 AFFX-R2-BS-DAP 95.6 A 52.8 A 30.9 A 59.77 0.32 AFFX-R2-BS-LYS 7.1 A 2.3 A 54.7 A 21.37 7.69 AFFX-R2-BS-PHE 6.6 A 9.5 A 5.6 A 7.22 0.85 AFFX-R2-BS-THR 1.3 A 46.3 A 22.2 A 23.27 17.10 ______________________________________________________________________