Report Type: Expression Report Date: 12:43PM 11/08/2008 ______________________________________________________________________ Filename: Arabidopsis hCZE2.CHP Probe Array Type: ATH1-121501 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 0.860 Scale Factor (SF): 40.103 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 26.94 Std: 0.31 Min: 26.40 Max: 28.00 Noise: Avg: 0.73 Std: 0.05 Min: 0.60 Max: 0.90 Corner+ Avg: 64 Count: 32 Corner- Avg: 11079 Count: 32 Central- Avg: 9997 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 22810 Number Present: 6739 29.5% Number Absent: 15732 69.0% Number Marginal: 339 1.5% Average Signal (P): 3140.9 Average Signal (A): 80.1 Average Signal (M): 309.8 Average Signal (All): 987.8 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-R2-AT-ACTIN 1898.0 P 588.9 P 1817.5 P 1434.82 0.96 AFFX-R2-AT-GAPDH 4024.5 P 1689.2 P 2856.89 0.42 AFFX-R2-AT-UBQ 5577.8 P 20175.5 P 12876.60 3.62 AFFX-ATHAL-ACTIN 65.8 A 516.6 P 2488.2 P 1023.51 37.83 AFFX-ATHAL-GAPDH 2764.8 P 1796.5 P 9644.5 P 4735.29 3.49 AFFX-ATHAL-UBQ 3306.3 P 8865.6 P 29756.6 P 13976.14 9.00 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 9254.4 P 18474.9 P 12231.4 P 13320.25 1.32 AFFX-BIOC 33958.4 P 20163.3 P 27060.81 0.59 AFFX-BIOD 45099.6 P 94396.1 P 69747.87 2.09 AFFX-CRE 205743.6 P 277235.0 P 241489.30 1.35 AFFX-DAP 93.5 A 75.1 A 18.8 A 62.46 0.20 AFFX-LYS 7.7 A 19.6 A 7.8 A 11.70 1.02 AFFX-PHE 3.6 A 5.3 A 11.4 A 6.75 3.19 AFFX-THR 46.8 A 40.2 A 102.0 A 63.00 2.18 AFFX-TRP 94.8 A 22.7 A 8.9 A 42.10 0.09 AFFX-R2-EC-BIOB 14415.1 P 15415.3 P 16015.5 P 15281.94 1.11 AFFX-R2-EC-BIOC 39456.0 P 42951.9 P 41203.91 1.09 AFFX-R2-EC-BIOD 112005.0 P 133249.5 P 122627.23 1.19 AFFX-R2-P1-CRE 272008.2 P 324281.7 P 298144.94 1.19 AFFX-R2-BS-DAP 54.8 A 166.2 A 111.3 A 110.78 2.03 AFFX-R2-BS-LYS 56.2 A 69.2 A 91.1 A 72.19 1.62 AFFX-R2-BS-PHE 14.6 A 6.2 A 23.0 A 14.62 1.58 AFFX-R2-BS-THR 5.9 A 36.1 A 13.3 A 18.45 2.25 ______________________________________________________________________