Report Type:	Expression Report
Date:          	05:21PM 06/04/2008
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Filename:		Arabidopsis pgPE2.CHP
Probe Array Type:	ATH1-121501
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
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Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.200
Scale Factor (SF):	13.170
TGT Value:		500
Norm Factor (NF):	1.000
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Background:
	Avg: 31.97	Std: 0.35	Min: 31.20	Max: 33.00
Noise:
	Avg: 1.15	Std: 0.04	Min: 1.10	Max: 1.30
Corner+
	Avg: 248		Count: 32
Corner-
	Avg: 18738		Count: 32
Central-
	Avg: 14760		Count: 9
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The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	22810
Number Present:	11075	48.6%
Number Absent:	11436	50.1%
Number Marginal:	299	1.3%

Average Signal (P):	1676.3
Average Signal (A):	43.3
Average Signal (M):	147.8
Average Signal (All):	837.6
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Housekeeping Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-R2-AT-ACTIN	4162.8	P	991.6	P	4627.0	P	3260.48	1.11
AFFX-R2-AT-GAPDH	3968.2	P	 	 	5283.7	P	4625.97	1.33
AFFX-R2-AT-UBQ	2334.4	P	 	 	12347.9	P	7341.17	5.29
AFFX-ATHAL-ACTIN	127.9	P	588.4	P	2494.9	P	1070.38	19.51
AFFX-ATHAL-GAPDH	1879.1	P	3454.7	P	9947.6	P	5093.80	5.29
AFFX-ATHAL-UBQ	1056.1	P	3458.3	P	9862.8	P	4792.38	9.34
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Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		7324.4	P	12742.1	P	10043.5	P	10036.68	1.37
AFFX-BIOC		24041.3	P	 	 	14314.5	P	19177.95	0.60
AFFX-BIOD		32820.2	P	 	 	66031.7	P	49425.92	2.01
AFFX-CRE		123910.6	P	 	 	163305.0	P	143607.80	1.32
AFFX-DAP		35.6	A	53.6	A	12.6	A	33.94	0.35
AFFX-LYS		23.2	A	10.4	A	7.8	A	13.83	0.34
AFFX-PHE		33.1	A	16.5	A	11.4	A	20.33	0.34
AFFX-THR		20.0	A	28.0	A	109.2	P	52.41	5.46
AFFX-TRP		41.1	A	6.5	A	56.9	A	34.83	1.39
AFFX-R2-EC-BIOB	10662.1	P	11137.0	P	11075.8	P	10958.28	1.04
AFFX-R2-EC-BIOC	30511.1	P	 	 	31417.4	P	30964.27	1.03
AFFX-R2-EC-BIOD	61770.1	P	 	 	78464.4	P	70117.23	1.27
AFFX-R2-P1-CRE	156837.0	P	 	 	174957.6	P	165897.30	1.12
AFFX-R2-BS-DAP	5.0	A	5.0	A	55.4	A	21.80	11.10
AFFX-R2-BS-LYS	4.7	A	7.1	A	1.0	A	4.23	0.21
AFFX-R2-BS-PHE	7.2	A	21.1	A	15.1	A	14.49	2.10
AFFX-R2-BS-THR	30.1	A	2.6	A	13.2	A	15.32	0.44
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