Report Type: Expression Report Date: 05:20PM 06/04/2008 ______________________________________________________________________ Filename: Arabidopsis pgCZE1.CHP Probe Array Type: ATH1-121501 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.180 Scale Factor (SF): 24.566 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 30.00 Std: 0.35 Min: 29.30 Max: 31.00 Noise: Avg: 1.07 Std: 0.03 Min: 0.90 Max: 1.10 Corner+ Avg: 211 Count: 32 Corner- Avg: 15323 Count: 32 Central- Avg: 11865 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 22810 Number Present: 8880 38.9% Number Absent: 13530 59.3% Number Marginal: 400 1.8% Average Signal (P): 2285.3 Average Signal (A): 73.2 Average Signal (M): 232.5 Average Signal (All): 937.2 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-R2-AT-ACTIN 8490.1 P 711.8 P 2894.9 P 4032.29 0.34 AFFX-R2-AT-GAPDH 4458.7 P 3971.0 P 4214.86 0.89 AFFX-R2-AT-UBQ 5063.1 P 23246.5 P 14154.80 4.59 AFFX-ATHAL-ACTIN 485.9 P 211.8 P 2769.7 P 1155.83 5.70 AFFX-ATHAL-GAPDH 739.9 P 3706.3 P 8272.3 P 4239.48 11.18 AFFX-ATHAL-UBQ 1901.6 P 3602.6 P 19656.1 P 8386.75 10.34 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 11103.6 P 18426.3 P 15391.4 P 14973.76 1.39 AFFX-BIOC 37403.4 P 23495.3 P 30449.36 0.63 AFFX-BIOD 52122.6 P 105180.2 P 78651.39 2.02 AFFX-CRE 195161.8 P 279878.0 P 237519.91 1.43 AFFX-DAP 17.5 A 13.5 A 65.8 A 32.25 3.77 AFFX-LYS 3.7 A 16.9 A 44.0 A 21.53 11.88 AFFX-PHE 12.1 A 9.8 A 13.8 A 11.90 1.14 AFFX-THR 83.9 P 13.4 A 189.1 M 95.47 2.25 AFFX-TRP 25.7 A 14.4 A 78.9 A 39.67 3.08 AFFX-R2-EC-BIOB 16548.7 P 20009.7 P 18340.3 P 18299.56 1.11 AFFX-R2-EC-BIOC 54509.5 P 57703.2 P 56106.38 1.06 AFFX-R2-EC-BIOD 104448.7 P 132293.3 P 118370.98 1.27 AFFX-R2-P1-CRE 276194.5 P 308017.9 P 292106.19 1.12 AFFX-R2-BS-DAP 48.8 A 5.4 A 16.7 A 23.64 0.34 AFFX-R2-BS-LYS 23.8 A 18.4 A 72.7 A 38.29 3.05 AFFX-R2-BS-PHE 1.6 A 98.3 P 18.5 A 39.48 11.25 AFFX-R2-BS-THR 130.1 A 12.6 A 146.5 A 96.40 1.13 ______________________________________________________________________