Report Type: Expression Report Date: 05:20PM 06/04/2008 ______________________________________________________________________ Filename: Arabidopsis pgCZSC1.CHP Probe Array Type: ATH1-121501 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.240 Scale Factor (SF): 13.577 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 29.84 Std: 0.31 Min: 29.20 Max: 30.80 Noise: Avg: 1.14 Std: 0.04 Min: 1.00 Max: 1.30 Corner+ Avg: 350 Count: 32 Corner- Avg: 24350 Count: 32 Central- Avg: 21802 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 22810 Number Present: 12438 54.5% Number Absent: 10041 44.0% Number Marginal: 331 1.5% Average Signal (P): 1307.6 Average Signal (A): 44.2 Average Signal (M): 151.9 Average Signal (All): 734.6 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-R2-AT-ACTIN 12835.5 P 1374.7 P 10840.4 P 8350.22 0.84 AFFX-R2-AT-GAPDH 3634.2 P 5627.8 P 4630.95 1.55 AFFX-R2-AT-UBQ 2783.4 P 16496.3 P 9639.84 5.93 AFFX-ATHAL-ACTIN 464.5 P 888.4 P 7977.6 P 3110.16 17.18 AFFX-ATHAL-GAPDH 999.7 P 3697.9 P 11967.6 P 5555.05 11.97 AFFX-ATHAL-UBQ 1600.2 P 3066.0 P 15929.3 P 6865.18 9.95 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 5651.9 P 9914.5 P 9832.6 P 8466.33 1.74 AFFX-BIOC 18055.7 P 11675.5 P 14865.56 0.65 AFFX-BIOD 27830.3 P 55593.6 P 41711.95 2.00 AFFX-CRE 115701.3 P 146221.7 P 130961.49 1.26 AFFX-DAP 59.3 M 5.3 A 11.6 A 25.38 0.19 AFFX-LYS 2.5 A 9.8 A 31.2 A 14.54 12.27 AFFX-PHE 6.2 A 12.0 A 15.3 A 11.18 2.48 AFFX-THR 37.4 A 92.1 A 26.8 A 52.09 0.72 AFFX-TRP 38.0 A 2.3 A 17.5 A 19.26 0.46 AFFX-R2-EC-BIOB 9543.4 P 9733.3 P 9493.7 P 9590.13 0.99 AFFX-R2-EC-BIOC 22824.1 P 21748.3 P 22286.24 0.95 AFFX-R2-EC-BIOD 65591.5 P 74051.8 P 69821.66 1.13 AFFX-R2-P1-CRE 149102.0 P 155283.9 P 152192.97 1.04 AFFX-R2-BS-DAP 2.0 A 45.9 A 29.0 A 25.60 14.59 AFFX-R2-BS-LYS 28.3 A 7.4 A 36.5 A 24.08 1.29 AFFX-R2-BS-PHE 2.6 A 3.0 A 13.4 A 6.32 5.25 AFFX-R2-BS-THR 24.0 A 8.9 A 8.9 A 13.94 0.37 ______________________________________________________________________