Report Type: Expression Report Date: 01:13PM 08/17/2006 ______________________________________________________________________ Filename: Soybean Inner Integument 4.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.650 Scale Factor (SF): 10.485 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 51.45 Std: 0.53 Min: 50.40 Max: 52.70 Noise: Avg: 2.45 Std: 0.05 Min: 2.30 Max: 2.60 Corner+ Avg: 519 Count: 32 Corner- Avg: 17474 Count: 32 Central- Avg: 17522 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 17196 28.2% Number Absent: 43190 70.7% Number Marginal: 692 1.1% Average Signal (P): 3372.8 Average Signal (A): 63.9 Average Signal (M): 233.8 Average Signal (All): 997.4 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 2491.3 P 4392.0 P 2865.5 P 3249.62 1.15 AFFX-BIOC 8586.1 P 6843.1 P 7714.59 0.80 AFFX-BIOD 18893.7 P 35856.8 P 27375.27 1.90 AFFX-CRE 93390.2 P 98580.9 P 95985.56 1.06 AFFX-DAP 3.2 A 54.6 A 46.3 A 34.66 14.63 AFFX-LYS 40.7 A 21.5 A 11.3 A 24.49 0.28 AFFX-PHE 11.6 A 9.3 A 32.5 A 17.80 2.79 AFFX-THR 20.2 A 5.9 A 12.6 A 12.93 0.62 AFFX-TRP 92.2 A 12.8 A 3.2 A 36.05 0.03 AFFX-R2-EC-BIOB 4501.5 P 4727.8 P 4388.4 P 4539.27 0.97 AFFX-R2-EC-BIOC 11157.1 P 9874.5 P 10515.82 0.89 AFFX-R2-EC-BIOD 50282.6 P 66576.6 P 58429.57 1.32 AFFX-R2-P1-CRE 104165.2 P 140431.7 P 122298.45 1.35 AFFX-R2-BS-DAP 7.4 A 7.2 A 21.5 A 12.02 2.92 AFFX-R2-BS-LYS 24.0 A 39.6 A 78.5 P 47.37 3.27 AFFX-R2-BS-PHE 14.7 A 92.8 A 11.6 A 39.70 0.79 AFFX-R2-BS-THR 93.6 A 164.6 A 16.4 A 91.52 0.17 ______________________________________________________________________