Report Type: Expression Report Date: 03:30PM 02/21/2008 ______________________________________________________________________ Filename: Arabidopsis GSUS3.CHP Probe Array Type: ATH1-121501 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 0.820 Scale Factor (SF): 19.316 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 27.15 Std: 0.27 Min: 26.50 Max: 28.00 Noise: Avg: 0.81 Std: 0.03 Min: 0.70 Max: 0.90 Corner+ Avg: 47 Count: 32 Corner- Avg: 14859 Count: 32 Central- Avg: 12372 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 22810 Number Present: 11309 49.6% Number Absent: 11160 48.9% Number Marginal: 341 1.5% Average Signal (P): 1583.8 Average Signal (A): 46.3 Average Signal (M): 159.1 Average Signal (All): 810.3 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-R2-AT-ACTIN 9949.8 P 1105.5 P 5961.2 P 5672.18 0.60 AFFX-R2-AT-GAPDH 9875.7 P 11872.8 P 10874.23 1.20 AFFX-R2-AT-UBQ 2851.2 P 16015.6 P 9433.40 5.62 AFFX-ATHAL-ACTIN 163.5 P 434.8 P 4180.8 P 1593.05 25.57 AFFX-ATHAL-GAPDH 3430.7 P 9289.3 P 24352.7 P 12357.59 7.10 AFFX-ATHAL-UBQ 1464.1 P 3902.9 P 19500.4 P 8289.13 13.32 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 5860.1 P 11689.4 P 11132.3 P 9560.60 1.90 AFFX-BIOC 24159.0 P 14411.2 P 19285.08 0.60 AFFX-BIOD 31811.5 P 64168.0 P 47989.73 2.02 AFFX-CRE 136034.7 P 215122.2 P 175578.47 1.58 AFFX-DAP 10.7 A 9.7 A 10.3 A 10.27 0.96 AFFX-LYS 34.6 A 4.7 A 23.5 A 20.96 0.68 AFFX-PHE 27.6 A 4.2 A 13.2 A 14.98 0.48 AFFX-THR 45.0 A 72.3 A 58.2 A 58.51 1.29 AFFX-TRP 25.5 A 14.9 A 71.9 A 37.43 2.82 AFFX-R2-EC-BIOB 9692.5 P 10537.0 P 10658.5 P 10296.00 1.10 AFFX-R2-EC-BIOC 28114.5 P 22652.8 P 25383.66 0.81 AFFX-R2-EC-BIOD 73112.6 P 87014.9 P 80063.76 1.19 AFFX-R2-P1-CRE 170201.6 P 196009.5 P 183105.59 1.15 AFFX-R2-BS-DAP 3.2 A 28.8 A 3.3 A 11.77 1.02 AFFX-R2-BS-LYS 23.6 A 13.7 A 5.4 A 14.23 0.23 AFFX-R2-BS-PHE 8.0 A 3.4 A 9.2 A 6.88 1.15 AFFX-R2-BS-THR 3.4 A 6.8 A 84.5 A 31.56 25.11 ______________________________________________________________________