Report Type: Expression Report Date: 09:31AM 07/03/2006 ______________________________________________________________________ Filename: Soy Hilum 5.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.640 Scale Factor (SF): 13.093 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 53.43 Std: 0.52 Min: 52.00 Max: 54.80 Noise: Avg: 2.40 Std: 0.05 Min: 2.30 Max: 2.50 Corner+ Avg: 573 Count: 32 Corner- Avg: 15499 Count: 32 Central- Avg: 15330 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 16424 26.9% Number Absent: 43936 71.9% Number Marginal: 718 1.2% Average Signal (P): 3298.9 Average Signal (A): 79.7 Average Signal (M): 315.3 Average Signal (All): 948.1 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 2352.8 P 4361.6 P 3439.8 P 3384.76 1.46 AFFX-BIOC 10024.0 P 7655.4 P 8839.70 0.76 AFFX-BIOD 14662.0 P 26976.1 P 20819.05 1.84 AFFX-CRE 76180.9 P 81203.1 P 78692.02 1.07 AFFX-DAP 24.5 A 11.3 A 10.1 A 15.32 0.41 AFFX-LYS 76.9 A 18.6 A 6.0 A 33.84 0.08 AFFX-PHE 36.2 A 14.4 A 14.5 A 21.73 0.40 AFFX-THR 5.8 A 17.9 A 22.2 A 15.28 3.86 AFFX-TRP 15.6 A 57.8 A 10.2 A 27.86 0.65 AFFX-R2-EC-BIOB 4109.2 P 4927.4 P 4733.3 P 4589.97 1.15 AFFX-R2-EC-BIOC 9846.3 P 8789.4 P 9317.88 0.89 AFFX-R2-EC-BIOD 38220.7 P 46048.3 P 42134.46 1.20 AFFX-R2-P1-CRE 91212.9 P 109620.9 P 100416.87 1.20 AFFX-R2-BS-DAP 14.5 A 8.2 A 21.6 A 14.76 1.48 AFFX-R2-BS-LYS 66.0 A 9.2 A 71.6 A 48.94 1.09 AFFX-R2-BS-PHE 66.4 A 18.8 A 18.1 A 34.45 0.27 AFFX-R2-BS-THR 84.7 A 75.1 A 11.3 A 57.03 0.13 ______________________________________________________________________