Report Type: Expression Report Date: 01:12PM 08/17/2006 ______________________________________________________________________ Filename: Soybean Epidermis 4.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.750 Scale Factor (SF): 22.129 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 54.36 Std: 0.28 Min: 53.50 Max: 55.20 Noise: Avg: 2.50 Std: 0.06 Min: 2.30 Max: 2.80 Corner+ Avg: 555 Count: 32 Corner- Avg: 19157 Count: 32 Central- Avg: 19578 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 14273 23.4% Number Absent: 46128 75.5% Number Marginal: 677 1.1% Average Signal (P): 4317.0 Average Signal (A): 108.0 Average Signal (M): 430.1 Average Signal (All): 1095.2 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 8476.1 P 15146.3 P 10237.8 P 11286.72 1.21 AFFX-BIOC 24424.1 P 18002.0 P 21213.05 0.74 AFFX-BIOD 41129.8 P 85005.5 P 63067.64 2.07 AFFX-CRE 189615.8 P 187835.3 P 188725.56 0.99 AFFX-DAP 30.5 A 25.9 A 31.3 A 29.21 1.03 AFFX-LYS 66.0 A 24.6 A 13.9 A 34.83 0.21 AFFX-PHE 21.5 A 24.4 A 36.2 A 27.38 1.68 AFFX-THR 26.6 A 62.9 A 16.7 A 35.40 0.63 AFFX-TRP 22.8 A 102.0 A 153.1 A 92.65 6.70 AFFX-R2-EC-BIOB 13938.6 P 14836.9 P 11401.0 P 13392.15 0.82 AFFX-R2-EC-BIOC 30619.8 P 28381.5 P 29500.64 0.93 AFFX-R2-EC-BIOD 108263.4 P 142809.4 P 125536.42 1.32 AFFX-R2-P1-CRE 218277.5 P 261234.8 P 239756.13 1.20 AFFX-R2-BS-DAP 29.4 A 19.2 A 52.7 A 33.79 1.79 AFFX-R2-BS-LYS 7.7 A 6.2 A 211.9 A 75.26 27.55 AFFX-R2-BS-PHE 25.6 A 25.8 A 94.8 A 48.76 3.70 AFFX-R2-BS-THR 16.6 A 16.2 A 23.6 A 18.81 1.42 ______________________________________________________________________