Report Type: Expression Report Date: 03:07PM 04/05/2007 ______________________________________________________________________ Filename: Soybean Heart Seed2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.600 Scale Factor (SF): 5.636 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 53.23 Std: 0.39 Min: 52.00 Max: 54.00 Noise: Avg: 2.29 Std: 0.06 Min: 2.20 Max: 2.50 Corner+ Avg: 430 Count: 32 Corner- Avg: 12990 Count: 32 Central- Avg: 11394 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 21832 35.7% Number Absent: 38548 63.1% Number Marginal: 698 1.1% Average Signal (P): 2157.2 Average Signal (A): 37.8 Average Signal (M): 135.4 Average Signal (All): 796.5 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 919.9 P 1679.0 P 1188.1 P 1262.35 1.29 AFFX-BIOC 3579.6 P 3050.9 P 3315.26 0.85 AFFX-BIOD 6043.5 P 10518.1 P 8280.80 1.74 AFFX-CRE 33654.5 P 35649.2 P 34651.85 1.06 AFFX-DAP 36.1 A 30.4 A 6.4 A 24.31 0.18 AFFX-LYS 4.8 A 18.8 A 4.8 A 9.45 1.00 AFFX-PHE 5.2 A 3.8 A 10.5 A 6.48 1.99 AFFX-THR 13.3 A 23.7 A 12.4 A 16.47 0.93 AFFX-TRP 6.4 A 34.0 A 24.2 A 21.58 3.76 AFFX-R2-EC-BIOB 2030.1 P 2055.7 P 1565.1 P 1883.62 0.77 AFFX-R2-EC-BIOC 4328.8 P 4316.0 P 4322.39 1.00 AFFX-R2-EC-BIOD 15869.8 P 17174.9 P 16522.33 1.08 AFFX-R2-P1-CRE 38510.9 P 47897.5 P 43204.23 1.24 AFFX-R2-BS-DAP 4.6 A 5.7 A 1.4 A 3.91 0.30 AFFX-R2-BS-LYS 4.2 A 2.5 A 75.1 P 27.30 17.80 AFFX-R2-BS-PHE 3.8 A 7.4 A 59.5 A 23.56 15.46 AFFX-R2-BS-THR 24.9 A 52.4 A 9.0 A 28.75 0.36 ______________________________________________________________________