Report Type: Expression Report Date: 02:25PM 10/10/2006 ______________________________________________________________________ Filename: Soybean Glob-Seed 2.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.280 Scale Factor (SF): 3.418 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 74.12 Std: 1.39 Min: 71.70 Max: 78.50 Noise: Avg: 3.77 Std: 0.11 Min: 3.40 Max: 4.00 Corner+ Avg: 679 Count: 32 Corner- Avg: 20042 Count: 32 Central- Avg: 19230 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 22471 36.8% Number Absent: 37921 62.1% Number Marginal: 686 1.1% Average Signal (P): 2017.5 Average Signal (A): 40.3 Average Signal (M): 139.1 Average Signal (All): 768.8 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 863.2 P 1637.0 P 1138.8 P 1213.01 1.32 AFFX-BIOC 2927.2 P 2722.7 P 2824.98 0.93 AFFX-BIOD 5692.4 P 11669.0 P 8680.70 2.05 AFFX-CRE 28249.5 P 30644.8 P 29447.14 1.08 AFFX-DAP 24.7 A 53.8 A 33.4 A 37.30 1.35 AFFX-LYS 4.1 A 64.3 A 5.4 A 24.60 1.30 AFFX-PHE 9.4 A 4.6 A 12.4 A 8.77 1.32 AFFX-THR 8.2 A 5.8 A 18.2 A 10.74 2.22 AFFX-TRP 7.4 A 1.6 A 28.0 A 12.37 3.76 AFFX-R2-EC-BIOB 1762.5 P 1835.2 P 1622.8 P 1740.20 0.92 AFFX-R2-EC-BIOC 3564.2 P 3492.7 P 3528.49 0.98 AFFX-R2-EC-BIOD 15073.3 P 18556.4 P 16814.84 1.23 AFFX-R2-P1-CRE 31778.2 P 40296.1 P 36037.11 1.27 AFFX-R2-BS-DAP 2.8 A 23.9 A 34.6 A 20.46 12.23 AFFX-R2-BS-LYS 2.2 A 2.0 A 82.9 P 29.03 36.90 AFFX-R2-BS-PHE 24.7 A 22.5 A 50.9 A 32.70 2.06 AFFX-R2-BS-THR 43.3 A 2.0 A 10.6 A 18.64 0.24 ______________________________________________________________________