Report Type: Expression Report Date: 06:27PM 12/05/2006 ______________________________________________________________________ Filename: Soybean Heart Hilum1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.340 Scale Factor (SF): 5.758 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 76.14 Std: 2.57 Min: 69.90 Max: 81.90 Noise: Avg: 3.66 Std: 0.17 Min: 3.40 Max: 4.20 Corner+ Avg: 557 Count: 32 Corner- Avg: 17381 Count: 32 Central- Avg: 17226 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 18770 30.7% Number Absent: 41662 68.2% Number Marginal: 646 1.1% Average Signal (P): 2807.0 Average Signal (A): 50.2 Average Signal (M): 187.5 Average Signal (All): 898.8 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 1828.1 P 3046.4 P 2277.4 P 2383.96 1.25 AFFX-BIOC 7100.2 P 6042.3 P 6571.21 0.85 AFFX-BIOD 11972.0 P 19540.7 P 15756.31 1.63 AFFX-CRE 54324.7 P 59648.9 P 56986.81 1.10 AFFX-DAP 46.1 A 84.9 A 2.7 A 44.58 0.06 AFFX-LYS 26.6 A 12.7 A 2.8 A 14.03 0.10 AFFX-PHE 5.8 A 5.9 A 21.3 A 11.03 3.65 AFFX-THR 5.3 A 33.0 A 24.8 A 21.06 4.66 AFFX-TRP 20.7 A 2.7 A 20.0 A 14.44 0.96 AFFX-R2-EC-BIOB 3503.2 P 3709.7 P 3106.5 P 3439.81 0.89 AFFX-R2-EC-BIOC 8363.6 P 7757.3 P 8060.45 0.93 AFFX-R2-EC-BIOD 29296.3 P 30826.9 P 30061.57 1.05 AFFX-R2-P1-CRE 58400.3 P 74200.0 P 66300.16 1.27 AFFX-R2-BS-DAP 15.0 A 61.2 A 3.1 A 26.44 0.21 AFFX-R2-BS-LYS 37.7 A 21.0 A 217.3 P 92.01 5.77 AFFX-R2-BS-PHE 44.3 A 37.8 A 44.8 A 42.32 1.01 AFFX-R2-BS-THR 50.6 A 72.4 A 21.5 A 48.14 0.42 ______________________________________________________________________