Report Type: Expression Report Date: 04:15PM 06/03/2006 ______________________________________________________________________ Filename: Endosp1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.460 Scale Factor (SF): 21.083 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 45.56 Std: 0.37 Min: 44.40 Max: 46.30 Noise: Avg: 2.11 Std: 0.03 Min: 2.00 Max: 2.20 Corner+ Avg: 594 Count: 32 Corner- Avg: 18371 Count: 32 Central- Avg: 20346 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 14666 24.0% Number Absent: 45706 74.8% Number Marginal: 706 1.2% Average Signal (P): 4449.3 Average Signal (A): 105.4 Average Signal (M): 408.5 Average Signal (All): 1152.0 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 5369.9 P 11500.5 P 7549.4 P 8139.97 1.41 AFFX-BIOC 14554.1 P 12861.2 P 13707.67 0.88 AFFX-BIOD 28427.0 P 64601.4 P 46514.18 2.27 AFFX-CRE 189182.6 P 190379.2 P 189780.88 1.01 AFFX-DAP 85.8 A 34.4 A 15.1 A 45.13 0.18 AFFX-LYS 13.0 A 41.1 A 14.8 A 22.97 1.14 AFFX-PHE 21.1 A 109.8 A 22.3 A 51.07 1.06 AFFX-THR 21.2 A 99.2 A 23.6 A 47.99 1.12 AFFX-TRP 106.9 A 44.1 A 17.7 A 56.27 0.17 AFFX-R2-EC-BIOB 10429.5 P 11347.0 P 11011.9 P 10929.47 1.06 AFFX-R2-EC-BIOC 21376.6 P 17821.6 P 19599.11 0.83 AFFX-R2-EC-BIOD 88832.9 P 115933.7 P 102383.31 1.31 AFFX-R2-P1-CRE 210619.3 P 256036.5 P 233327.94 1.22 AFFX-R2-BS-DAP 12.0 A 5.7 A 13.7 A 10.48 1.14 AFFX-R2-BS-LYS 5.7 A 8.4 A 177.4 A 63.83 31.23 AFFX-R2-BS-PHE 72.4 A 17.3 A 111.8 A 67.17 1.54 AFFX-R2-BS-THR 38.8 A 26.7 A 7.8 A 24.41 0.20 ______________________________________________________________________